v5.0.13
Contents:
Introduction
Ten Steps to a Running Model
Installation
ESM Tools
Transitioning from the Shell Version
YAML File Syntax
YAML File Hierarchy
ESM-Tools Variables
Supported Models
ESM Master
ESM-Versions
ESM Runscripts
ESM MOTD
Cookbook
Frequently Asked Questions
Python Packages
ESM Tools Code Documentation
Contributing
Credits
ESM Tools
Docs
»
Index
Edit on GitHub
Index
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A
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B
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C
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D
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E
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F
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G
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H
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I
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J
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L
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M
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N
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O
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P
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Q
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R
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S
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T
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U
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V
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W
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Y
_
_calendar (esm_calendar.esm_calendar.Date attribute)
A
action (esm_master.database.installation attribute)
actually_find_variable() (in module esm_parser.esm_parser)
add() (esm_calendar.esm_calendar.Date method)
add_batch_hostfile() (in module esm_runscripts.compute)
add_commands() (esm_environment.esm_environment.EnvironmentInfos static method)
add_coupling() (esm_runscripts.oasis.oasis method)
(esm_runscripts.yac.yac method)
add_couplings() (esm_runscripts.coupler.coupler_class method)
add_entries_from_chapter() (in module esm_parser.esm_parser)
add_entries_to_chapter_in_config() (in module esm_parser.esm_parser)
add_entry_to_chapter() (in module esm_parser.esm_parser)
add_esm_runscripts_defaults_to_config() (esm_runscripts.sim_objects.SimulationSetup method)
add_esm_var() (esm_environment.esm_environment.EnvironmentInfos method)
add_files() (esm_runscripts.coupler.coupler_class method)
add_input_coupling() (esm_runscripts.oasis.oasis method)
add_more_important_tasks() (in module esm_parser.esm_parser)
add_output_file() (esm_runscripts.oasis.oasis method)
(esm_runscripts.yac.yac method)
add_restart_files() (esm_runscripts.oasis.oasis method)
(esm_runscripts.yac.yac method)
add_submission_info() (in module esm_runscripts.prepare)
all_done() (in module esm_runscripts.tidy)
all_files_to_copy_append() (in module esm_runscripts.compute)
apply_config_changes() (esm_environment.esm_environment.EnvironmentInfos method)
apply_echam_disturbance() (esm_runscripts.namelists.Namelist static method)
apply_last_minute_changes() (in module esm_runscripts.last_minute)
apply_model_changes() (esm_environment.esm_environment.EnvironmentInfos method)
Archive (class in esm_archiving.database.model)
archive (esm_archiving.database.model.Experiments attribute)
(esm_archiving.database.model.Tarball attribute)
archive_folder (esm_runscripts.database.experiment attribute)
archive_id (esm_archiving.database.model.Tarball attribute)
archive_mistral() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
ArchivedFile (class in esm_archiving.database.model)
ask_column() (esm_database.esm_database.DisplayDatabase method)
ask_dataset() (esm_database.esm_database.DisplayDatabase method)
assemble() (in module esm_runscripts.filelists)
assemble_command_list() (esm_master.task.Task method)
assemble_error_list() (in module esm_runscripts.tidy)
assemble_intermediate_files_and_finalize_targets() (in module esm_runscripts.filelists)
assemble_log_message() (in module esm_runscripts.helpers)
attach_single_config() (in module esm_parser.esm_parser)
attach_to_config_and_reduce_keyword() (in module esm_parser.esm_parser)
attach_to_config_and_remove() (in module esm_parser.esm_parser)
B
basic_add_entries_to_chapter_in_config() (in module esm_parser.esm_parser)
basic_add_more_important_tasks() (in module esm_parser.esm_parser)
basic_choose_blocks() (in module esm_parser.esm_parser)
basic_determine_set_variables_in_choose_block() (in module esm_parser.esm_parser)
basic_find_add_entries_in_config() (in module esm_parser.esm_parser)
basic_find_one_independent_choose() (in module esm_parser.esm_parser)
basic_find_remove_entries_in_config() (in module esm_parser.esm_parser)
basic_list_all_keys_starting_with_choose() (in module esm_parser.esm_parser)
basic_remove_entries_from_chapter_in_config() (in module esm_parser.esm_parser)
batch_system (class in esm_runscripts.batch_system)
C
calc_requirements() (esm_runscripts.batch_system.batch_system method)
(esm_runscripts.slurm.Slurm method)
calc_requirements_multi_srun() (esm_runscripts.slurm.Slurm method)
calculate_requirements() (esm_runscripts.batch_system.batch_system static method)
Calendar (class in esm_calendar.esm_calendar)
cat_file() (in module esm_runscripts.inspect)
check_changes_duplicates() (in module esm_parser.yaml_to_dict)
check_duplicates() (in module esm_parser.yaml_to_dict)
check_for_errors() (in module esm_runscripts.tidy)
check_for_unknown_files() (in module esm_runscripts.filelists)
check_if_download_task() (esm_master.task.Task method)
check_if_submitted() (esm_runscripts.batch_system.batch_system method)
(esm_runscripts.slurm.Slurm static method)
check_if_target() (esm_master.task.Task method)
check_importable_tools() (in module esm_version_checker.cli)
check_model_lresume() (in module esm_runscripts.prepare)
check_requirements() (esm_master.task.Task method)
check_tar_lists() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
choose_blocks() (in module esm_parser.esm_parser)
choose_needed_files() (in module esm_runscripts.filelists)
class_in (esm_database.location_database.database_location attribute)
clean_run_dir() (esm_runscripts.tidy method)
(in module esm_runscripts.tidy)
cleanup_dummy_script() (esm_environment.esm_environment.EnvironmentInfos static method)
cleanup_script() (esm_master.task.Task method)
close() (esm_archiving.external.pypftp.Pftp method)
color_diff() (in module esm_runscripts.compute)
compile_binaries() (esm_master.task.Task method)
compile_model() (in module esm_runscripts.compute)
complete_all_file_movements() (in module esm_runscripts.filelists)
complete_config() (in module esm_parser.esm_parser)
complete_one_file_movement() (in module esm_runscripts.filelists)
complete_restart_in() (in module esm_runscripts.filelists)
complete_sources() (in module esm_runscripts.filelists)
complete_targets() (esm_master.software_package.software_package method)
(in module esm_runscripts.filelists)
compute() (esm_runscripts.sim_objects.SimulationSetup method)
ConfigSetup (class in esm_parser.esm_parser)
contains_underscore() (in module esm_parser.esm_parser)
convert() (in module esm_parser.esm_parser)
copy_all_results_to_exp() (in module esm_runscripts.tidy)
copy_files() (in module esm_runscripts.filelists)
copy_files_to_thisrun() (in module esm_runscripts.compute)
copy_files_to_work() (in module esm_runscripts.compute)
copy_stuff_back_from_work() (in module esm_runscripts.tidy)
copy_tools_to_thisrun() (in module esm_runscripts.compute)
could_be_bool() (in module esm_parser.esm_parser)
could_be_complex() (in module esm_parser.esm_parser)
could_be_float() (in module esm_parser.esm_parser)
could_be_int() (in module esm_parser.esm_parser)
coupler_class (class in esm_runscripts.coupler)
cpuh (esm_runscripts.database.experiment attribute)
create_env_loader() (in module esm_parser.yaml_to_dict)
create_missing_file_movement_entries() (in module esm_runscripts.filelists)
create_new_files() (in module esm_runscripts.compute)
created_at (esm_archiving.database.model.Experiments attribute)
cwd() (esm_archiving.external.pypftp.Pftp method)
D
database_basic_entry() (in module esm_runscripts.database_actions)
database_entry() (in module esm_master.database_actions)
(in module esm_runscripts.database_actions)
database_entry_check() (in module esm_runscripts.database_actions)
database_entry_crashed() (in module esm_runscripts.database_actions)
database_entry_start() (in module esm_runscripts.database_actions)
database_entry_success() (in module esm_runscripts.database_actions)
database_location (class in esm_database.location_database)
Date (class in esm_calendar.esm_calendar)
Dateformat (class in esm_calendar.esm_calendar)
datesep (esm_calendar.esm_calendar.Dateformat attribute)
DatestampLocationError
day (esm_calendar.esm_calendar.Date attribute)
day_in_month() (esm_calendar.esm_calendar.Calendar method)
day_in_year() (esm_calendar.esm_calendar.Calendar method)
day_of_year() (esm_calendar.esm_calendar.Date method)
decision_maker() (esm_database.esm_database.DisplayDatabase method)
deep_update() (in module esm_parser.esm_parser)
def_path() (esm_runscripts.helpers.SmartSink method)
del_value_for_nested_key() (in module esm_parser.esm_parser)
delete_original_data() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
determine_computer_from_hostname() (in module esm_parser.esm_parser)
determine_datestamp_location() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
determine_nodelist() (esm_runscripts.batch_system.batch_system static method)
determine_potential_datestamp_locations() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
determine_regex_list_match() (in module esm_parser.esm_parser)
determine_set_variables_in_choose_block() (in module esm_parser.esm_parser)
dict_merge() (in module esm_parser.esm_parser)
dir_size() (in module esm_runscripts.inspect)
directories() (esm_archiving.external.pypftp.Pftp method)
DisplayDatabase (class in esm_database.esm_database)
dist_is_editable() (in module esm_version_checker.cli)
distribute_per_model_defaults() (esm_runscripts.sim_objects.SimulationSetup method)
do_math_in_entry() (in module esm_parser.esm_parser)
download() (esm_archiving.external.pypftp.Pftp static method)
(in module esm_archiving.external.pypftp)
download_folders() (esm_master.task.Task method)
dtsep (esm_calendar.esm_calendar.Dateformat attribute)
E
edit_dataset() (esm_database.esm_database.DisplayDatabase method)
editable_dist_location() (in module esm_version_checker.cli)
end_it_all() (in module esm_runscripts.helpers)
environment_infos (class in esm_environment.esm_environment)
EnvironmentInfos (class in esm_environment.esm_environment)
esm_archiving
module
esm_archiving.cli
module
esm_archiving.config
module
esm_archiving.database
module
esm_archiving.database.model
module
esm_archiving.esm_archiving
module
esm_archiving.external
module
esm_archiving.external.pypftp
module
esm_calendar
module
esm_calendar.esm_calendar
module
esm_database
module
esm_database.cli
module
esm_database.esm_database
module
esm_database.getch
module
esm_database.location_database
module
esm_environment
module
esm_environment.esm_environment
module
esm_master
module
esm_master.cli
module
esm_master.database
module
esm_master.database_actions
module
esm_master.software_package
module
esm_master.task
module
esm_parser
module
esm_parser.esm_parser
module
esm_parser.shell_to_dict
module
esm_parser.yaml_to_dict
module
esm_profile
module
esm_profile.esm_profile
module
esm_rcfile
module
esm_rcfile.esm_rcfile
module
esm_runscripts
module
esm_runscripts.batch_system
module
esm_runscripts.cli
module
esm_runscripts.compute
module
esm_runscripts.coupler
module
esm_runscripts.database
module
esm_runscripts.database_actions
module
esm_runscripts.filelists
module
esm_runscripts.helpers
module
esm_runscripts.inspect
module
esm_runscripts.last_minute
module
esm_runscripts.methods
module
esm_runscripts.namelists
module
esm_runscripts.oasis
module
esm_runscripts.postprocess
module
esm_runscripts.prepare
module
esm_runscripts.sim_objects
module
esm_runscripts.slurm
module
esm_runscripts.tidy
module
esm_runscripts.virtual_env_builder
module
esm_runscripts.yac
module
esm_tools_github_url (esm_version_checker.cli.GlobalVars attribute)
,
[1]
esm_tools_installed (esm_version_checker.cli.GlobalVars attribute)
,
[1]
esm_version_checker
module
esm_version_checker.cli
module
EsmConfigFileError
EsmParserError
EsmRcfileError
evaluate() (in module esm_runscripts.helpers)
execute() (esm_master.task.Task method)
exists() (esm_archiving.external.pypftp.Pftp method)
exp_folder (esm_runscripts.database.experiment attribute)
exp_ref (esm_archiving.database.model.Archive attribute)
experiment (class in esm_runscripts.database)
Experiments (class in esm_archiving.database.model)
expid (esm_archiving.database.model.Experiments attribute)
(esm_runscripts.database.experiment attribute)
expid_id (esm_archiving.database.model.Archive attribute)
F
filename (esm_runscripts.slurm.Slurm attribute)
files (esm_archiving.database.model.Tarball attribute)
files() (esm_archiving.external.pypftp.Pftp method)
fill_in_infos() (esm_master.software_package.software_package method)
finalize() (esm_parser.esm_parser.ConfigSetup method)
(esm_runscripts.coupler.coupler_class method)
(esm_runscripts.oasis.oasis method)
(esm_runscripts.yac.yac method)
finalize_config() (in module esm_runscripts.prepare)
find_add_entries_in_config() (in module esm_parser.esm_parser)
find_indices_of() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
find_key() (in module esm_parser.esm_parser)
find_last_choose() (in module esm_parser.yaml_to_dict)
find_last_prepared_run() (in module esm_runscripts.prepare)
find_one_independent_choose() (in module esm_parser.esm_parser)
find_package() (in module esm_runscripts.virtual_env_builder)
find_remaining_hours() (in module esm_calendar.esm_calendar)
find_remaining_minutes() (in module esm_calendar.esm_calendar)
find_remove_entries_in_config() (in module esm_parser.esm_parser)
find_value_for_nested_key() (in module esm_parser.esm_parser)
find_variable() (in module esm_parser.esm_parser)
finish_priority_merge() (in module esm_parser.esm_parser)
fname (esm_archiving.database.model.ArchivedFile attribute)
(esm_archiving.database.model.Tarball attribute)
folder (esm_master.database.installation attribute)
format() (esm_calendar.esm_calendar.Date method)
from_github (esm_version_checker.cli.GlobalVars attribute)
,
[1]
from_list() (esm_calendar.esm_calendar.Date class method)
fromlist() (esm_calendar.esm_calendar.Date class method)
G
gb (esm_runscripts.database.experiment attribute)
GeneralConfig (class in esm_parser.esm_parser)
get_base_prefix_compat() (in module esm_runscripts.virtual_env_builder)
get_batch_header() (esm_runscripts.batch_system.batch_system static method)
get_command_list() (esm_master.software_package.software_package method)
get_comp_type() (esm_master.software_package.software_package method)
get_coupling_changes() (esm_master.software_package.software_package method)
get_environment() (esm_runscripts.batch_system.batch_system static method)
get_esm_package_attributes() (in module esm_version_checker.cli)
get_esm_packages() (in module esm_version_checker.cli)
get_extra() (esm_runscripts.batch_system.batch_system static method)
get_files_for_date_range() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
get_job_state() (esm_runscripts.batch_system.batch_system method)
(esm_runscripts.slurm.Slurm static method)
get_jobid() (esm_runscripts.batch_system.batch_system method)
(esm_runscripts.slurm.Slurm static method)
get_last_jobid() (in module esm_runscripts.tidy)
get_list_from_filepattern() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
get_method() (in module esm_runscripts.filelists)
get_movement() (in module esm_runscripts.filelists)
get_one_of() (in module esm_database.getch)
get_rc_entry() (in module esm_rcfile.esm_rcfile)
get_repo_info() (esm_master.software_package.software_package method)
get_run_commands() (esm_runscripts.batch_system.batch_system static method)
get_run_commands_multisrun() (in module esm_runscripts.batch_system)
get_sad_filename() (esm_runscripts.batch_system.batch_system static method)
get_shell_commands() (esm_environment.esm_environment.EnvironmentInfos method)
get_submit_command() (esm_runscripts.batch_system.batch_system static method)
get_subpackages() (esm_master.software_package.software_package method)
get_subtasks() (esm_master.task.Task method)
get_targets() (esm_master.software_package.software_package method)
get_total_config_from_user_config() (esm_runscripts.sim_objects.SimulationSetup method)
get_user_config_from_command_line() (esm_runscripts.sim_objects.SimulationSetup method)
global_options_decorator() (in module esm_version_checker.cli)
GlobalVars (class in esm_version_checker.cli)
globbing() (in module esm_runscripts.filelists)
group_files() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
group_indexes() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
H
HOST (esm_archiving.external.pypftp.Pftp attribute)
hour (esm_calendar.esm_calendar.Date attribute)
I
id (esm_archiving.database.model.Archive attribute)
(esm_archiving.database.model.ArchivedFile attribute)
(esm_archiving.database.model.Experiments attribute)
(esm_archiving.database.model.Tarball attribute)
(esm_database.location_database.database_location attribute)
(esm_master.database.installation attribute)
(esm_runscripts.database.experiment attribute)
import_rc_file() (in module esm_rcfile.esm_rcfile)
in_virtualenv() (in module esm_runscripts.virtual_env_builder)
init_monitor_file() (in module esm_runscripts.tidy)
initialize_batch_system() (in module esm_runscripts.prepare)
initialize_coupler() (in module esm_runscripts.prepare)
initialize_experiment_logfile() (in module esm_runscripts.compute)
initialize_from_shell_script() (in module esm_parser.esm_parser)
initialize_from_yaml() (in module esm_parser.esm_parser)
inspect() (esm_runscripts.sim_objects.SimulationSetup method)
inspect_config() (in module esm_runscripts.inspect)
inspect_file() (in module esm_runscripts.inspect)
inspect_folder() (in module esm_runscripts.inspect)
inspect_namelists() (in module esm_runscripts.inspect)
inspect_overview() (in module esm_runscripts.inspect)
inspect_size() (in module esm_runscripts.inspect)
install() (in module esm_master.task)
installation (class in esm_master.database)
is_connected() (esm_archiving.external.pypftp.Pftp method)
isdir() (esm_archiving.external.pypftp.Pftp method)
isfile() (esm_archiving.external.pypftp.Pftp method)
isleapyear() (esm_calendar.esm_calendar.Calendar method)
,
[1]
islink() (esm_archiving.external.pypftp.Pftp method)
J
job_is_still_running() (esm_runscripts.batch_system.batch_system method)
(esm_runscripts.slurm.Slurm static method)
(in module esm_runscripts.tidy)
L
last_minute_changes (class in esm_runscripts.last_minute)
list_all_keys_starting_with_choose() (in module esm_parser.esm_parser)
list_all_keys_with_priority_marker() (in module esm_parser.esm_parser)
list_required_dirs() (esm_master.task.Task method)
list_to_multikey() (in module esm_parser.esm_parser)
listdir() (esm_archiving.external.pypftp.Pftp method)
listing() (esm_archiving.external.pypftp.Pftp method)
listing2() (esm_archiving.external.pypftp.Pftp method)
load() (esm_runscripts.tidy.RunFolders method)
load_config() (in module esm_archiving.config)
location (esm_database.location_database.database_location attribute)
log_tarfile_contents() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
log_used_files() (in module esm_runscripts.filelists)
look_for_file() (in module esm_parser.esm_parser)
M
main() (in module esm_database.cli)
(in module esm_master.cli)
(in module esm_runscripts.cli)
makedirs() (esm_archiving.external.pypftp.Pftp method)
makesense() (esm_calendar.esm_calendar.Date method)
mark_dates() (in module esm_parser.esm_parser)
marked_date_to_date_object() (in module esm_parser.esm_parser)
maybe_resubmit() (in module esm_runscripts.tidy)
merge_dicts() (in module esm_parser.esm_parser)
mini_calc_reqs() (esm_runscripts.slurm.Slurm static method)
mini_recursive_run_func() (in module esm_parser.shell_to_dict)
minute (esm_calendar.esm_calendar.Date attribute)
mkdir() (esm_archiving.external.pypftp.Pftp method)
mlsd() (esm_archiving.external.pypftp.Pftp method)
model_env_into_computer() (in module esm_runscripts.prepare)
modify_files() (in module esm_runscripts.compute)
modify_namelists() (in module esm_runscripts.compute)
module
esm_archiving
esm_archiving.cli
esm_archiving.config
esm_archiving.database
esm_archiving.database.model
esm_archiving.esm_archiving
esm_archiving.external
esm_archiving.external.pypftp
esm_calendar
esm_calendar.esm_calendar
esm_database
esm_database.cli
esm_database.esm_database
esm_database.getch
esm_database.location_database
esm_environment
esm_environment.esm_environment
esm_master
esm_master.cli
esm_master.database
esm_master.database_actions
esm_master.software_package
esm_master.task
esm_parser
esm_parser.esm_parser
esm_parser.shell_to_dict
esm_parser.yaml_to_dict
esm_profile
esm_profile.esm_profile
esm_rcfile
esm_rcfile.esm_rcfile
esm_runscripts
esm_runscripts.batch_system
esm_runscripts.cli
esm_runscripts.compute
esm_runscripts.coupler
esm_runscripts.database
esm_runscripts.database_actions
esm_runscripts.filelists
esm_runscripts.helpers
esm_runscripts.inspect
esm_runscripts.last_minute
esm_runscripts.methods
esm_runscripts.namelists
esm_runscripts.oasis
esm_runscripts.postprocess
esm_runscripts.prepare
esm_runscripts.sim_objects
esm_runscripts.slurm
esm_runscripts.tidy
esm_runscripts.virtual_env_builder
esm_runscripts.yac
esm_version_checker
esm_version_checker.cli
month (esm_calendar.esm_calendar.Date attribute)
monthnames (esm_calendar.esm_calendar.Calendar attribute)
,
[1]
N
Namelist (class in esm_runscripts.namelists)
namelist (class in esm_runscripts.namelists)
new_deep_update() (in module esm_parser.esm_parser)
new_dict_merge() (in module esm_parser.esm_parser)
nicer_output() (esm_master.database.installation static method)
(esm_runscripts.database.experiment static method)
nmls_finalize() (esm_runscripts.namelists.Namelist static method)
nmls_load() (esm_runscripts.namelists.Namelist static method)
nmls_modify() (esm_runscripts.namelists.Namelist static method)
nmls_output() (esm_runscripts.namelists.Namelist static method)
nmls_output_all() (esm_runscripts.namelists.Namelist static method)
nmls_remove() (esm_runscripts.namelists.Namelist static method)
O
oasis (class in esm_runscripts.oasis)
on_disk (esm_archiving.database.model.ArchivedFile attribute)
on_tape (esm_archiving.database.model.ArchivedFile attribute)
order_subtasks() (esm_master.task.Task method)
outcome (esm_runscripts.database.experiment attribute)
output() (esm_calendar.esm_calendar.Date method)
(esm_environment.esm_environment.EnvironmentInfos method)
(esm_master.software_package.software_package method)
(esm_master.task.Task method)
output_steps() (esm_master.task.Task method)
output_writer() (esm_database.esm_database.DisplayDatabase method)
P
pack_tarfile() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
parse_shargs() (in module esm_database.cli)
(in module esm_runscripts.cli)
path (esm_runscripts.slurm.Slurm attribute)
perform_actions() (in module esm_parser.esm_parser)
Pftp (class in esm_archiving.external.pypftp)
pip_install() (in module esm_version_checker.cli)
pip_or_pull() (in module esm_version_checker.cli)
pip_uninstall() (in module esm_version_checker.cli)
pip_upgrade() (in module esm_version_checker.cli)
PORT (esm_archiving.external.pypftp.Pftp attribute)
postprocess() (esm_runscripts.sim_objects.SimulationSetup method)
pprint_config() (in module esm_parser.esm_parser)
prepare() (esm_runscripts.coupler.coupler_class method)
prepare_coupler_files() (in module esm_runscripts.compute)
prepare_restarts() (esm_runscripts.coupler.coupler_class method)
(esm_runscripts.oasis.oasis method)
(esm_runscripts.yac.yac method)
print_config_files() (esm_runscripts.coupler.coupler_class method)
(esm_runscripts.oasis.oasis method)
(esm_runscripts.yac.yac method)
priority_merge_dicts() (in module esm_parser.esm_parser)
purify_booleans() (in module esm_parser.esm_parser)
purify_cases() (in module esm_parser.shell_to_dict)
purify_expid_in() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
pwd() (esm_archiving.external.pypftp.Pftp method)
Q
query_yes_no() (in module esm_archiving.esm_archiving)
quit() (esm_archiving.external.pypftp.Pftp method)
R
reconnect() (esm_archiving.external.pypftp.Pftp method)
recursive_get() (in module esm_parser.esm_parser)
recursive_run_function() (in module esm_parser.esm_parser)
register() (in module esm_database.location_database)
remap_old_new_keys() (in module esm_parser.shell_to_dict)
remove() (esm_archiving.external.pypftp.Pftp method)
remove_datasets() (esm_database.esm_database.DisplayDatabase method)
remove_entries_from_chapter() (in module esm_parser.esm_parser)
remove_entries_from_chapter_in_config() (in module esm_parser.esm_parser)
remove_entry_from_chapter() (in module esm_parser.esm_parser)
removedirs() (esm_archiving.external.pypftp.Pftp method)
rename() (esm_archiving.external.pypftp.Pftp method)
rename_sources_to_targets() (in module esm_runscripts.filelists)
replace_model_dir() (esm_environment.esm_environment.EnvironmentInfos method)
replace_var() (in module esm_master.software_package)
replace_year_placeholder() (in module esm_runscripts.filelists)
report_missing_files() (in module esm_runscripts.filelists)
report_single_package() (in module esm_version_checker.cli)
resolve_basic_choose() (in module esm_parser.esm_parser)
resolve_choose() (in module esm_parser.esm_parser)
resolve_choose_with_var() (in module esm_parser.esm_parser)
resolve_remove_and_add() (in module esm_parser.esm_parser)
resolve_some_choose_blocks() (in module esm_runscripts.prepare)
resolve_symlinks() (in module esm_runscripts.filelists)
restore_protected_last_minute_changes() (in module esm_runscripts.last_minute)
reuse_sources() (in module esm_runscripts.filelists)
rm_r() (in module esm_runscripts.tidy)
rmdir() (esm_archiving.external.pypftp.Pftp method)
run_command() (in module esm_archiving.esm_archiving)
run_job() (in module esm_runscripts.compute)
(in module esm_runscripts.inspect)
(in module esm_runscripts.postprocess)
(in module esm_runscripts.prepare)
(in module esm_runscripts.tidy)
run_recursive_functions() (esm_parser.esm_parser.ConfigSetup method)
run_timestamp (esm_runscripts.database.experiment attribute)
RunFolders (class in esm_runscripts.tidy)
runtime (esm_runscripts.database.experiment attribute)
S
save() (esm_runscripts.tidy.RunFolders method)
sday() (esm_calendar.esm_calendar.Date property)
sdoy() (esm_calendar.esm_calendar.Date property)
second (esm_calendar.esm_calendar.Date attribute)
select_stuff() (esm_database.esm_database.DisplayDatabase method)
set_global_attr() (in module esm_runscripts.methods)
set_leapyear() (in module esm_runscripts.prepare)
set_logfile() (in module esm_runscripts.prepare)
set_most_dates() (in module esm_runscripts.prepare)
set_overall_calendar() (in module esm_runscripts.prepare)
set_parent_info() (in module esm_runscripts.prepare)
set_prev_date() (in module esm_runscripts.prepare)
set_rc_entry() (in module esm_rcfile.esm_rcfile)
set_restart_chunk() (in module esm_runscripts.prepare)
setup_name (esm_master.database.installation attribute)
(esm_runscripts.database.experiment attribute)
shell_file_to_dict() (in module esm_parser.esm_parser)
ShellscriptToUserConfig() (in module esm_parser.shell_to_dict)
shour() (esm_calendar.esm_calendar.Date property)
signal_tidy_completion() (in module esm_runscripts.tidy)
SimulationSetup (class in esm_runscripts.sim_objects)
sink() (esm_runscripts.helpers.SmartSink method)
size() (esm_archiving.external.pypftp.Pftp method)
size_bytes_to_human() (in module esm_runscripts.tidy)
size_human_to_bytes() (in module esm_runscripts.tidy)
Slurm (class in esm_runscripts.slurm)
SmartSink (class in esm_runscripts.helpers)
sminute() (esm_calendar.esm_calendar.Date property)
smonth() (esm_calendar.esm_calendar.Date property)
software_package (class in esm_master.software_package)
sort_files_to_tarlists() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
split_list_due_to_size_limit() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
ssecond() (esm_calendar.esm_calendar.Date property)
stamp_filepattern() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
stamp_files() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
start_post_job() (in module esm_runscripts.tidy)
start_various_jobtypes_after_compute() (in module esm_runscripts.tidy)
stat() (esm_archiving.external.pypftp.Pftp method)
sub_date() (esm_calendar.esm_calendar.Date method)
sub_tuple() (esm_calendar.esm_calendar.Date method)
submit() (esm_runscripts.batch_system.batch_system static method)
sum_tar_lists() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
sum_tar_lists_human_readable() (in module esm_archiving)
(in module esm_archiving.esm_archiving)
syear() (esm_calendar.esm_calendar.Date property)
T
table_name (esm_database.location_database.database_location attribute)
Tarball (class in esm_archiving.database.model)
tarball (esm_archiving.database.model.ArchivedFile attribute)
tarball_id (esm_archiving.database.model.ArchivedFile attribute)
tarballs (esm_archiving.database.model.Archive attribute)
target_subfolders() (in module esm_runscripts.filelists)
Task (class in esm_master.task)
throw_away_some_infiles() (in module esm_runscripts.tidy)
tidy() (esm_runscripts.coupler.coupler_class method)
(esm_runscripts.sim_objects.SimulationSetup method)
tidy_coupler() (in module esm_runscripts.tidy)
time_between() (esm_calendar.esm_calendar.Date method)
timesep (esm_calendar.esm_calendar.Dateformat attribute)
timestamp (esm_master.database.installation attribute)
(esm_runscripts.database.experiment attribute)
timeunits (esm_calendar.esm_calendar.Calendar attribute)
,
[1]
timing() (in module esm_profile.esm_profile)
to_boolean() (in module esm_parser.esm_parser)
topline() (esm_database.location_database.database_location static method)
(esm_master.database.installation static method)
(esm_runscripts.database.experiment static method)
U
UnknownBatchSystemError
unmark_dates() (in module esm_parser.esm_parser)
update() (esm_runscripts.tidy.RunFolders method)
update_runscript() (in module esm_runscripts.compute)
upload() (esm_archiving.external.pypftp.Pftp static method)
(in module esm_archiving.external.pypftp)
user_error() (in module esm_parser.esm_parser)
user_note() (in module esm_parser.esm_parser)
user_owns() (in module esm_version_checker.cli)
V
validate() (esm_master.task.Task method)
validate_only_subtask() (esm_master.task.Task method)
venv_bootstrap() (in module esm_runscripts.virtual_env_builder)
viz() (esm_runscripts.sim_objects.SimulationSetup method)
vprint() (in module esm_runscripts.helpers)
W
wait_and_observe() (in module esm_runscripts.tidy)
wake_up_call() (in module esm_runscripts.tidy)
walk() (esm_archiving.external.pypftp.Pftp method)
walk_for_directories() (esm_archiving.external.pypftp.Pftp method)
walk_for_files() (esm_archiving.external.pypftp.Pftp method)
write_config_yaml() (in module esm_archiving.config)
write_dummy_script() (esm_environment.esm_environment.EnvironmentInfos method)
write_log() (esm_runscripts.helpers.SmartSink method)
write_simple_runscript() (esm_runscripts.batch_system.batch_system static method)
write_to_log() (in module esm_runscripts.helpers)
Y
yac (class in esm_runscripts.yac)
yaml_file_to_dict() (in module esm_parser.yaml_to_dict)
year (esm_calendar.esm_calendar.Date attribute)
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